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Seqera

Seqera MCP integration

Lists pipelines, workflow runs, and compute environments, submits Wave container builds, and returns build status and logs.

Connect SeqeraSee all integrations

14actions available

  1. Home/
  2. Integrations/
  3. Seqera

Three actions you can hand over today

Every action runs live through MCP. Nothing to build, nothing to maintain.

  • Get wave build status

    Lyro checks if a Wave container build succeeded. The team sees build status without leaving chat.

  • Get wave build logs

    Lyro retrieves logs for a failed Wave build. The team diagnoses errors and resolves issues faster.

  • List pipelines

    Lyro fetches all available pipelines for the user. The team reviews what workflows are accessible.

See all 14 actions

How businesses use Seqera + Lyro

Each card is one request a support team gets, and the Seqera actions Lyro runs to close it.

  • search

    Answer which pipelines and runs exist right now

    Lyro lists the pipelines accessible to the authenticated account with search and sorting, pages through workflows in a given workspace, and returns the compute environments a run could target.

    List PipelinesList WorkflowsList Compute Environments
  • cloud_sync

    Build a container with Wave on demand

    Lyro submits a Wave request to build an image from a Dockerfile, Conda recipe, or package list, or to front a private registry, and returns the container name Wave makes available.

    Create Wave ContainerInspect Wave ContainerGet Wave Build Status
  • bolt

    Troubleshoot a container build that failed

    Lyro checks the status behind a Wave build ID, pulls the build logs when it did not succeed, and reports the API version and commit ID when the problem looks platform-side rather than local.

    Get Wave Build LogsGet Wave Build StatusGet Service Info
  • task_alt

    Check a name is valid before anything is created

    Lyro validates a proposed pipeline or action name against Seqera and lists the action event types a workspace supports, so a clash or an unsupported trigger surfaces before work is built around it.

    Validate Pipeline NameValidate Action NameList Action Event Types

How it works

Get started in 3 steps

Connect once, then just ask. There is no workflow builder to learn and nothing to maintain — Lyro reads the Seqera actions it has and picks the ones a request needs.

  1. 01

    Connect Seqera

    Authorize the Seqera account your team already uses — one consent screen, no API keys, no mapping tables. Lyro can only do what you granted that account, and you can disconnect it at any time.

  2. 02

    Tell your agent what you need

    Describe the job the way you would hand it to a teammate. Lyro maps it to the Seqera actions that close it and chains as many as the request needs.

  3. 03

    Watch it work

    The agent runs the actions inside the conversation the customer is already in, so nobody copies data between tabs and your team can take over at any point.

    Get started free

Seqera · Lyro

What can you do in Seqera without me setting anything up?

These, right away:

  • Create wave container
  • Get organization details
  • Get service info

Great, let's start with the first one.

Ask Lyro anything...

FAQ

Everything else about Seqera

Setup, permissions, and the limits of what Lyro can do inside Seqera.

  • No. This toolkit reads pipelines, workflows, and compute environments and works with Wave containers, but exposes no launch or cancel action. Lyro can tell you what is running and what a run would need, and the launch itself stays in Seqera.

  • Only what the connected credential can. List Organizations and Get Organization Details return the accessible organizations, Get User Info identifies the authenticated account, and List Workflows and List Action Event Types are scoped by workspace, so visibility follows the token rather than being widened by the integration.

  • Create Wave Container accepts a Dockerfile, a Conda recipe, or package specifications, and can also provide access to a private container registry, returning the name of the container it makes available. Inspect Wave Container then returns registry, manifest, digest, configuration, and OCI compatibility details for an image.

  • Whatever the build printed. Get Wave Build Logs returns the log output for a build ID, which can include internal paths, package versions, and registry references from your own environment, so scope the connection to people who should see that detail.

Every action available in Seqera

All 14 actions your agent can call on Seqera, straight from the live MCP connection.

  • Create wave container

    Submit a request to Wave for accessing a private container registry or building a container image on-the-fly.

  • Get organization details

    Retrieve detailed information about a specific organization.

  • Get service info

    Retrieve information about the Seqera API service.

  • Get user info

    Retrieve information about the authenticated user.

  • Get wave build logs

    Get logs for a container build by build ID.

  • Get wave build status

    Retrieve the status of a Wave container build by build ID.

  • Inspect wave container

    Inspect container image metadata via Wave.

  • List action event types

    List supported action event types.

  • List compute environments

    Retrieve a list of compute environments.

  • List organizations

    List all organizations.

  • List pipelines

    List all pipelines accessible to the authenticated user.

  • List workflows

    List workflows.

  • Validate action name

    Validate action name.

  • Validate pipeline name

    Validate a pipeline name.

The tools Seqera sits next to

Same connection, same setup. Pick the next one your team already uses.

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    Felt

    Reports a map's layers and elements, adds or updates features as GeoJSON, organises maps into projects, and clones maps as templates.

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    LeadBoxer

    Pulls a lead's sessions and event history, retags records as qualification changes, and logs conversions back from the conversation.

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    Parsehub

    Retrieves every scraping project on a ParseHub account, so a team confirms what is already configured without a dashboard login.

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    Serpdog

    Renders any URL as an image on request, choosing full-page, device-emulation, delay, and dark-mode options per capture.

  • World news apiarrow_outward

    World news api

    Pulls clustered top headlines by country and date, extracts full articles into structured JSON, and turns any news page into a usable feed.

Browse every integration
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Ready to connect Seqera?

Authorize the account and your agent has all 14 actions from the first conversation.

Connect SeqeraTalk to sales
Connect SeqeraTalk to sales
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